Genomic Analysis of a Novel Heavy Metal Resistant Isolate from a Black Sea Contaminated Sediment with the Potential to Degrade Alkanes: Plantactinospora alkalitolerans sp. nov.
Yazarlar (6)
Lorena Carro Universidad De Salamanca, İspanya
Doç. Dr. Aysel VEYİSOĞLU Sinop Üniversitesi, Türkiye
Prof. Dr. Kıymet Güven Eskisehir Technical University, Türkiye
Peter Schumann Deutsche Sammlung Von Mikroorganismen Und Zellkulturen Gmbh, Almanya
Hans Peter Klenk Newcastle University, İngiltere
Nevzat Şahin
Ondokuz Mayis Üniversitesi, Türkiye
Ondokuz Mayis Üniversitesi, Türkiye
| Makale Türü |
Özgün Makale
(SSCI, AHCI, SCI, SCI-Exp dergilerinde yayınlanan tam makale)
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| Dergi Adı | Diversity (Q2) | ||
| Dergi ISSN | 1424-2818 Dergi Bilgileri (2022) | ||
| Dergi Tarandığı Indeksler | SCI-Expanded | ||
| Makale Dili | İngilizce | Basım Tarihi | 11-2022 |
| Cilt / Sayı / Sayfa | 14 / 11 / 947–0 | DOI | 10.3390/d14110947 |
| Makale Linki | http://dx.doi.org/10.3390/d14110947 | ||
| UAK Araştırma Alanları |
Bakteriyoloji
Mikrobiyoloji
Moleküler Biyoloji
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| Özet |
| Microorganisms that grow in poorly studied environments are of special interest when new biotechnological applications are searched. The Melet river offshore sediments at the Black Sea have been described to contain an important number of contaminants from upstream industries which have been accumulating for years. Bacteria of such habitats must be adapted to the presence of those compounds and in some cases, are able to use them as carbon sources. In the analysis of some samples recovered from this environment, an actinobacterial strain was isolated, named as S1510T, and its taxonomic position was determined using a combination of phenotypic and genotypic properties. Strain S1510T presented phenotypic properties typical of members of the family Micromonosporaceae and was assigned to the Plantactinospora genus, based on the phylogenetic analyses of the 16S rRNA gene and whole-genome sequences. Low dDDH (digital DNA-DNA hybridization) values with other members of the genus confirmed that Plantactinospora sp. S1510T represents a novel species, and is proposed with the new name Plantactinospora alkalitolerans. The strain presented characteristics not previously described for other species in the genus, such as its high tolerance to alkaline pHs, the presence of genes related to the production and degradation of alkanes (oleABCD, ssuAD, almA), the degradation of several aromatic compounds, and the tolerance to high heavy metal concentrations. In addition, Plantactinospora sp. S1510T presents several bioclusters to produce nonribosomal peptide-synthetases, terpenes, polyketide synthases, and … |
| Anahtar Kelimeler |
| alkane | biocluster | contaminant | heavy metal | marine sediment | Micromonosporaceae |
BM Sürdürülebilir Kalkınma Amaçları
| Atıf Sayıları | |
| Web of Science | 5 |
| Scopus | 4 |
| Google Scholar | 6 |